Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ORB75378.1AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (467 aa)    
Predicted Functional Partners:
ORB75258.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.957
ORB75259.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.957
ORB76051.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.940
ORB74229.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.940
ORB73615.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.927
ORB75379.1
acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.907
ORB75380.1
acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.907
ORB75022.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.890
ORB75377.1
(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.854
ORB76138.1
3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.849
Your Current Organism:
Mycobacterium scrofulaceum
NCBI taxonomy Id: 1783
Other names: ATCC 19981, CCUG 29045, CIP 105416, DSM 43992, JCM 6381, M. scrofulaceum, NCTC 10803
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