Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ORB75014.1DinB family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (218 aa)    
Predicted Functional Partners:
ORB75011.1
decaprenylphospho-beta-D-erythro-pentofuranosid- 2-ulose 2-reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.780
ORB75012.1
Arabinofuranosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.780
ORB75010.1
decaprenylphosphoryl-beta-D-ribose oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.761
ORB75013.1
Arabinosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.732
ORB75009.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.697
ORB75699.1
Cupin; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.696
ORB73601.1
Fumarylacetoacetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.576
ORB75067.1
Arabinosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.571
ORB75015.1
Arabinosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.554
ORB75008.1
Nucleoside diphosphate kinase regulator; Regulates the synthesis of nucleoside triphosphates for nucleic acid synthesis, CTP for lipid synthesis, and GTP for protein elongation; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.550
Your Current Organism:
Mycobacterium scrofulaceum
NCBI taxonomy Id: 1783
Other names: ATCC 19981, CCUG 29045, CIP 105416, DSM 43992, JCM 6381, M. scrofulaceum, NCTC 10803
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