Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ORB74334.1Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology. (132 aa)    
Predicted Functional Partners:
ORB74393.1
TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.647
ORB73813.1
MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.599
ORB74300.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.592
ORB72149.1
methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.575
ORB72150.1
methylmalonyl-CoA mutase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.575
ORB74299.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.526
ORB69809.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.482
ORB69755.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.480
ORB75384.1
LAO/AO transport system ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.441
ORB72148.1
ATPase/protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.441
Your Current Organism:
Mycobacterium scrofulaceum
NCBI taxonomy Id: 1783
Other names: ATCC 19981, CCUG 29045, CIP 105416, DSM 43992, JCM 6381, M. scrofulaceum, NCTC 10803
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