Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ORB72672.1 | ORB72674.1 | BST44_18520 | BST44_18530 | SAM-dependent methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.745 |
ORB72672.1 | ORB74109.1 | BST44_18520 | BST44_10800 | SAM-dependent methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.553 |
ORB72672.1 | dtd | BST44_18520 | BST44_18525 | SAM-dependent methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity. | D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family. | 0.802 |
ORB72672.1 | purN | BST44_18520 | BST44_21020 | SAM-dependent methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity. | Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate. | 0.418 |
ORB72674.1 | ORB72672.1 | BST44_18530 | BST44_18520 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | SAM-dependent methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity. | 0.745 |
ORB72674.1 | dtd | BST44_18530 | BST44_18525 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family. | 0.798 |
ORB74109.1 | ORB72672.1 | BST44_10800 | BST44_18520 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | SAM-dependent methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity. | 0.553 |
dtd | ORB72672.1 | BST44_18525 | BST44_18520 | D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family. | SAM-dependent methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity. | 0.802 |
dtd | ORB72674.1 | BST44_18525 | BST44_18530 | D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.798 |
purN | ORB72672.1 | BST44_21020 | BST44_18520 | Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate. | SAM-dependent methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity. | 0.418 |