STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAE0165Conserved hypothetical protein. (114 aa)    
Predicted Functional Partners:
PAE0166
paREP11.
   
   0.853
PAE0164a
Hypothetical protein.
       0.762
PAE2546
paREP11.
 
 
   0.674
PAE2506
paREP11.
  
  
  0.672
PAE1153
Conserved hypothetical protein.
 
 
   0.638
PAE1894
Conserved hypothetical protein.
 
     0.514
PAE1902
Conserved hypothetical protein.
 
     0.502
PAE0273
Conserved hypothetical protein.
 
     0.492
PAE0153
Hypothetical protein.
 
     0.475
PAE1155
Conserved hypothetical protein.
 
     0.470
Your Current Organism:
Pyrobaculum aerophilum
NCBI taxonomy Id: 178306
Other names: P. aerophilum str. IM2, Pyrobaculum aerophilum IM2, Pyrobaculum aerophilum str. IM2, Pyrobaculum aerophilum strain IM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.