Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PAE0431Glycosyltransferase (type 1); Cell envelope; Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides. (389 aa)    
Predicted Functional Partners:
PAE0430
Glycosyltransferase (type 1); Cell envelope; Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides.
 
     0.883
PAE3422
Conserved hypothetical protein.
  
 
 0.615
PAE0419
Glycosyl transferase, putative; Unclassified.
 
   
 0.614
PAE1290
Conserved within P. aerophilum part 2, authentic frameshift; Hypothetical; Conserved within genome.
 
  
 0.533
PAE3657
Transport and binding proteins; Unknown substrate.
 
     0.465
PAE0566
Hypothetical; Conserved within genome.
 
  
 0.459
PAE0061
Extracellular solute binding protein, conjectural; Transport and binding proteins; Anions.
 
     0.444
PAE1735
Conserved hypothetical protein.
   
 0.430
PAE2544
Conserved hypothetical protein.
   
 0.430
PAE2004
Serine/threonine specific protein phosphatase; Regulatory functions; General.
   
 
 0.429
Your Current Organism:
Pyrobaculum aerophilum
NCBI taxonomy Id: 178306
Other names: P. aerophilum str. IM2, Pyrobaculum aerophilum IM2, Pyrobaculum aerophilum str. IM2, Pyrobaculum aerophilum strain IM2
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