Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PAE0540Glycosyltransferase (type 1); Cell envelope; Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides. (402 aa)    
Predicted Functional Partners:
PAE0542
Glycosyltransferase (type 1); Cell envelope; Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides.
 
     0.814
PAE0541
Glycosyltransferase (type 1); Cell envelope; Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides.
 
     0.805
PAE3422
Conserved hypothetical protein.
  
 
 0.615
PAE0539
Hypothetical protein.
       0.561
PAE2004
Serine/threonine specific protein phosphatase; Regulatory functions; General.
 
 
 
 0.513
PAE1290
Conserved within P. aerophilum part 2, authentic frameshift; Hypothetical; Conserved within genome.
 
  
 0.490
PAE0437
Glycosyltransferase (type 2); Cell envelope; Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides.
 
  
 0.452
PAE0566
Hypothetical; Conserved within genome.
 
  
 0.450
PAE0712
Surface layer-associated STABLE protease, conjectural; Protein fate; Degradation of proteins, peptides, and glycopeptides; Belongs to the peptidase S8 family.
 
  
 0.444
PAE1735
Conserved hypothetical protein.
   
 0.430
Your Current Organism:
Pyrobaculum aerophilum
NCBI taxonomy Id: 178306
Other names: P. aerophilum str. IM2, Pyrobaculum aerophilum IM2, Pyrobaculum aerophilum str. IM2, Pyrobaculum aerophilum strain IM2
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.