Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
PAE0637 | PAE0638 | Peptidase (possible proline dipeptidase); Protein fate; Degradation of proteins, peptides, and glycopeptides; Belongs to the peptidase M24B family. | Conserved hypothetical protein. | 0.735 |
PAE0637 | PAE0639 | Peptidase (possible proline dipeptidase); Protein fate; Degradation of proteins, peptides, and glycopeptides; Belongs to the peptidase M24B family. | Hypothetical protein. | 0.538 |
PAE0637 | PAE0640 | Peptidase (possible proline dipeptidase); Protein fate; Degradation of proteins, peptides, and glycopeptides; Belongs to the peptidase M24B family. | Transport and binding proteins; Unknown substrate. | 0.538 |
PAE0638 | PAE0637 | Conserved hypothetical protein. | Peptidase (possible proline dipeptidase); Protein fate; Degradation of proteins, peptides, and glycopeptides; Belongs to the peptidase M24B family. | 0.735 |
PAE0638 | PAE0639 | Conserved hypothetical protein. | Hypothetical protein. | 0.582 |
PAE0638 | PAE0640 | Conserved hypothetical protein. | Transport and binding proteins; Unknown substrate. | 0.582 |
PAE0639 | PAE0637 | Hypothetical protein. | Peptidase (possible proline dipeptidase); Protein fate; Degradation of proteins, peptides, and glycopeptides; Belongs to the peptidase M24B family. | 0.538 |
PAE0639 | PAE0638 | Hypothetical protein. | Conserved hypothetical protein. | 0.582 |
PAE0639 | PAE0640 | Hypothetical protein. | Transport and binding proteins; Unknown substrate. | 0.794 |
PAE0640 | PAE0637 | Transport and binding proteins; Unknown substrate. | Peptidase (possible proline dipeptidase); Protein fate; Degradation of proteins, peptides, and glycopeptides; Belongs to the peptidase M24B family. | 0.538 |
PAE0640 | PAE0638 | Transport and binding proteins; Unknown substrate. | Conserved hypothetical protein. | 0.582 |
PAE0640 | PAE0639 | Transport and binding proteins; Unknown substrate. | Hypothetical protein. | 0.794 |