Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PAE0678 | PAE0680 | PAE0678 | PAE0680 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.875 |
PAE0678 | PAE0681 | PAE0678 | PAE0681 | Conserved hypothetical protein. | Conserved hypothetical protein; Belongs to the UPF0179 family. | 0.701 |
PAE0678 | PAE0683 | PAE0678 | PAE0683 | Conserved hypothetical protein. | Cytidyltransferase; Unclassified. | 0.497 |
PAE0678 | PAE0779 | PAE0678 | PAE0779 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.619 |
PAE0678 | PAE0832 | PAE0678 | PAE0832 | Conserved hypothetical protein. | Adenylate cyclase; Purines, pyrimidines, nucleosides, and nucleotides; Purine ribonucleotide biosynthesis. | 0.605 |
PAE0678 | PAE1653 | PAE0678 | PAE1653 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.509 |
PAE0678 | PAE1735 | PAE0678 | PAE1735 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.519 |
PAE0678 | PAE2255 | PAE0678 | PAE2255 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.537 |
PAE0678 | PAE3407 | PAE0678 | PAE3407 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.491 |
PAE0678 | nusA | PAE0678 | PAE0669 | Conserved hypothetical protein. | Transcription termination factor NusA, putative; Participates in transcription termination. Belongs to the NusA family. | 0.496 |
PAE0680 | PAE0678 | PAE0680 | PAE0678 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.875 |
PAE0680 | PAE0681 | PAE0680 | PAE0681 | Conserved hypothetical protein. | Conserved hypothetical protein; Belongs to the UPF0179 family. | 0.591 |
PAE0680 | PAE1653 | PAE0680 | PAE1653 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.800 |
PAE0681 | PAE0678 | PAE0681 | PAE0678 | Conserved hypothetical protein; Belongs to the UPF0179 family. | Conserved hypothetical protein. | 0.701 |
PAE0681 | PAE0680 | PAE0681 | PAE0680 | Conserved hypothetical protein; Belongs to the UPF0179 family. | Conserved hypothetical protein. | 0.591 |
PAE0681 | PAE0683 | PAE0681 | PAE0683 | Conserved hypothetical protein; Belongs to the UPF0179 family. | Cytidyltransferase; Unclassified. | 0.513 |
PAE0681 | PAE1653 | PAE0681 | PAE1653 | Conserved hypothetical protein; Belongs to the UPF0179 family. | Conserved hypothetical protein. | 0.431 |
PAE0683 | PAE0678 | PAE0683 | PAE0678 | Cytidyltransferase; Unclassified. | Conserved hypothetical protein. | 0.497 |
PAE0683 | PAE0681 | PAE0683 | PAE0681 | Cytidyltransferase; Unclassified. | Conserved hypothetical protein; Belongs to the UPF0179 family. | 0.513 |
PAE0779 | PAE0678 | PAE0779 | PAE0678 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.619 |
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