STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
pcmprotein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. (205 aa)    
Predicted Functional Partners:
PAE2926
NADH-ubiquinone oxidoreductase subunit; Energy metabolism; Electron transport.
  
   0.837
PAE1567
NADH-ubiquinone oxidoreductase subunit; Energy metabolism; Electron transport.
  
   0.819
PAE3520
NADH-ubiquinone oxidoreductase subunit; Energy metabolism; Electron transport.
  
   0.816
PAE0700
Hypothetical protein.
       0.773
PAE2928
NADH-ubiquinone oxidoreductase subunit; Energy metabolism; Electron transport; Belongs to the complex I 20 kDa subunit family.
  
   0.762
PAE1581
NADH-ubiquinone oxidoreductase subunit; Energy metabolism; Electron transport.
  
   0.755
PAE1580
NADH-ubiquinone oxidoreductase subunit; Energy metabolism; Electron transport.
 
   0.730
PAE0617
Oxidoreductase, truncation; Unclassified.
  
   0.720
PAE1582
NADH-ubiquinone oxidoreductase subunit; Energy metabolism; Electron transport.
  
   0.720
PAE1568
NADH-ubiquinone oxidoreductase subunit; Energy metabolism; Electron transport.
  
   0.713
Your Current Organism:
Pyrobaculum aerophilum
NCBI taxonomy Id: 178306
Other names: P. aerophilum str. IM2, Pyrobaculum aerophilum IM2, Pyrobaculum aerophilum str. IM2, Pyrobaculum aerophilum strain IM2
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