STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAE1127Conserved hypothetical protein. (306 aa)    
Predicted Functional Partners:
PAE3247
Morphine 6-dehydrogenase, conjectural; Unclassified.
 
 
 0.837
PAE1861
Hypothetical protein with 4 ankyrin repeats; Unclassified.
 
 
 0.763
PAE0891
Hypothetical protein.
   
   0.709
PAE2981
Acetylpolyamine aminohydrolase, putative; Energy metabolism; Amino acids and amines.
   
   0.709
fni
Conserved protein (possible oxidoreductase); Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
  
 
 0.701
PAE1381
Aldo-keto reductase family protein; Unclassified.
 
 
0.690
PAE0696
AAA family ATPase, possible cell division control protein cdc48; Cellular processes; Cell division.
   
 
 0.684
PAE3171
AAA family ATPase, possible cell division control protein cdc48; Cellular processes; Cell division.
   
 
 0.684
PAE0606
Oxidoreductase, conjectural; Unclassified.
 
 
0.678
PAE2929
Aldo-keto reductase, putative; Unclassified.
 
 
0.674
Your Current Organism:
Pyrobaculum aerophilum
NCBI taxonomy Id: 178306
Other names: P. aerophilum str. IM2, Pyrobaculum aerophilum IM2, Pyrobaculum aerophilum str. IM2, Pyrobaculum aerophilum strain IM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.