STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAE1185Galactokinase; Energy metabolism; Sugars. (361 aa)    
Predicted Functional Partners:
PAE1184
Galactose-1-phosphate uridylyltransferase; Energy metabolism; Sugars.
 0.999
PAE1186
Conserved hypothetical protein.
  
    0.832
PAE0870
Conserved NAD/P oxidoreductase; Unclassified.
  
 
 0.806
PAE0318
Hypothetical protein.
 
  
 0.691
PAE1736
Beta-glucosidase; Energy metabolism; Sugars; Belongs to the glycosyl hydrolase 1 family.
 
   
 0.681
PAE3437
Glucokinase (ROK family protein), conjectural; Energy metabolism; Sugars.
 
  
 0.663
PAE1610
Glucose-6-phosphate isomerase, conjectural; Catalyzes the isomerization of both glucose 6-phosphate and epimeric mannose 6-phosphate at a similar catalytic efficiency.
   
 
 0.657
PAE1968
Alpha-glucosidase; Energy metabolism; Sugars; Belongs to the glycosyl hydrolase 31 family.
 
  
 0.585
PAE0835
Sugar kinase, possible phosphofructokinase; Energy metabolism; Glycolysis/gluconeogenesis; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.524
PAE1188
Hypothetical protein.
       0.505
Your Current Organism:
Pyrobaculum aerophilum
NCBI taxonomy Id: 178306
Other names: P. aerophilum str. IM2, Pyrobaculum aerophilum IM2, Pyrobaculum aerophilum str. IM2, Pyrobaculum aerophilum strain IM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.