STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAE12094-alpha-glucanotransferase (malQ); Energy metabolism; Biosynthesis and degradation of polysaccharides. (468 aa)    
Predicted Functional Partners:
PAE3422
Conserved hypothetical protein.
 
 
 0.988
PAE3429
Glycogen synthase (starch (bacterial glycogen) synthase), putative; Energy metabolism; Biosynthesis and degradation of polysaccharides.
 
 
 0.986
PAE1968
Alpha-glucosidase; Energy metabolism; Sugars; Belongs to the glycosyl hydrolase 31 family.
    
 0.944
PAE3428
Conserved hypothetical protein.
    
  0.910
PAE3455
Maltose ABC transporter, maltose binding protein; Transport and binding proteins; Carbohydrates, organic alcohols, and acids.
  
  
 0.820
PAE1208
Hypothetical protein.
       0.793
PAE3457
Maltose ABC transporter, permease protein; Transport and binding proteins; Carbohydrates, organic alcohols, and acids.
  
  
 0.750
PAE0318
Hypothetical protein.
 
  
 0.748
argF
Ornithine carbamoyltransferase (argF); Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family.
     
 0.610
PAE3437
Glucokinase (ROK family protein), conjectural; Energy metabolism; Sugars.
   
 
 0.560
Your Current Organism:
Pyrobaculum aerophilum
NCBI taxonomy Id: 178306
Other names: P. aerophilum str. IM2, Pyrobaculum aerophilum IM2, Pyrobaculum aerophilum str. IM2, Pyrobaculum aerophilum strain IM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.