STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAE1247Transport and binding proteins; Cations. (291 aa)    
Predicted Functional Partners:
PAE1246
Manganese ABC transporter ATP-binding protein; Transport and binding proteins; Cations.
 
 0.999
PAE0564
Conserved hypothetical protein.
  
  
 0.976
PAE2309
Ferric uptake regulator, putative; Regulatory functions; General.
  
  
 0.757
PAE0731
Transcriptional regulatory protein, conjectural; Regulatory functions; General.
  
  
 0.737
PAE1251
Hypothetical protein.
 
     0.596
PAE1244
Translation initiation factor aIF-2B subunit, conjectural; Protein synthesis; Translation factors.
       0.556
sod
Superoxide dismutase (sod); Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems; Belongs to the iron/manganese superoxide dismutase family.
 
   
 0.546
PAE1242
Hypothetical protein.
       0.537
PAE2000
Glutamine transport system permease protein, putative; Transport and binding proteins; Amino acids, peptides and amines.
  
 
 0.535
PAE1241
Conserved hypothetical protein.
       0.528
Your Current Organism:
Pyrobaculum aerophilum
NCBI taxonomy Id: 178306
Other names: P. aerophilum str. IM2, Pyrobaculum aerophilum IM2, Pyrobaculum aerophilum str. IM2, Pyrobaculum aerophilum strain IM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.