STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAE1290Conserved within P. aerophilum part 2, authentic frameshift; Hypothetical; Conserved within genome. (250 aa)    
Predicted Functional Partners:
PAE0653
Conserved hypothetical protein.
  
     0.621
PAE1292
Conserved within P. aerophilum part 1, authentic frameshift; Hypothetical; Conserved within genome.
       0.565
PAE1069
Hypothetical protein.
 
     0.554
PAE0727
Molybdenum cofactor biosynthesis protein D/E; Biosynthesis of cofactors, prosthetic groups, and carriers; Molybdopterin.
  
    0.539
PAE0419
Glycosyl transferase, putative; Unclassified.
 
   0.536
PAE0374
Conserved hypothetical protein.
  
     0.517
PAE0431
Glycosyltransferase (type 1); Cell envelope; Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides.
 
    0.517
PAE0017
Conserved hypothetical protein.
  
    0.490
PAE0540
Glycosyltransferase (type 1); Cell envelope; Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides.
 
    0.468
PAE0712
Surface layer-associated STABLE protease, conjectural; Protein fate; Degradation of proteins, peptides, and glycopeptides; Belongs to the peptidase S8 family.
 
    0.443
Your Current Organism:
Pyrobaculum aerophilum
NCBI taxonomy Id: 178306
Other names: P. aerophilum str. IM2, Pyrobaculum aerophilum IM2, Pyrobaculum aerophilum str. IM2, Pyrobaculum aerophilum strain IM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.