STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAE1302Tricorn protease; Degrades oligopeptides; Belongs to the peptidase S41B family. (1016 aa)    
Predicted Functional Partners:
PAE1303
Hypothetical protein.
       0.563
PAE1296
Transport and binding proteins; Amino acids, peptides and amines.
       0.541
PAE1297
Transport and binding proteins; Amino acids, peptides and amines.
       0.541
PAE1298
Dipeptide ABC transporter, permease protein; Transport and binding proteins; Amino acids, peptides and amines.
       0.541
PAE1299
Dipeptide ABC transporter, permease protein; Transport and binding proteins; Amino acids, peptides and amines.
       0.541
PAE1300
Transport and binding proteins; Amino acids, peptides and amines.
       0.541
PAE1295
Conserved hypothetical protein.
       0.490
PAE2734
Rieske iron sulfur protein, putative; Energy metabolism; Electron transport.
  
     0.404
Your Current Organism:
Pyrobaculum aerophilum
NCBI taxonomy Id: 178306
Other names: P. aerophilum str. IM2, Pyrobaculum aerophilum IM2, Pyrobaculum aerophilum str. IM2, Pyrobaculum aerophilum strain IM2
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.