Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PAE1332 | PAE1334 | PAE1332 | PAE1334 | Conserved hypothetical protein. | Possible respiratory chain protein; Energy metabolism; Electron transport. | 0.661 |
PAE1332 | PAE1336 | PAE1332 | PAE1336 | Conserved hypothetical protein. | Possible respiratory chain protein; Energy metabolism; Electron transport. | 0.661 |
PAE1332 | PAE1337 | PAE1332 | PAE1337 | Conserved hypothetical protein. | Cytochrome C oxidase subunit I /III; Energy metabolism; Electron transport; Belongs to the heme-copper respiratory oxidase family. | 0.912 |
PAE1332 | PAE1338 | PAE1332 | PAE1338 | Conserved hypothetical protein. | Cytochrome C oxidase subunit II; Energy metabolism; Electron transport. | 0.911 |
PAE1332 | PAE1340 | PAE1332 | PAE1340 | Conserved hypothetical protein. | Respiratory chain protein (soxI homolog); Energy metabolism; Electron transport. | 0.663 |
PAE1332 | PAE1349 | PAE1332 | PAE1349 | Conserved hypothetical protein. | Rieske iron sulfur protein (parR); Energy metabolism; Electron transport. | 0.937 |
PAE1332 | PAE1350 | PAE1332 | PAE1350 | Conserved hypothetical protein. | Cytochrome b/b6; Energy metabolism; Electron transport. | 0.935 |
PAE1332 | PAE1355 | PAE1332 | PAE1355 | Conserved hypothetical protein. | Cytochrome C oxidase subunit II; Energy metabolism; Electron transport. | 0.793 |
PAE1332 | PAE1357 | PAE1332 | PAE1357 | Conserved hypothetical protein. | Cytochrome C oxidase subunit I; Energy metabolism; Electron transport; Belongs to the heme-copper respiratory oxidase family. | 0.791 |
PAE1332 | ctaB1 | PAE1332 | PAE1333 | Conserved hypothetical protein. | Cytochrome C oxidase assembly factor; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.822 |
PAE1334 | PAE1332 | PAE1334 | PAE1332 | Possible respiratory chain protein; Energy metabolism; Electron transport. | Conserved hypothetical protein. | 0.661 |
PAE1334 | PAE1336 | PAE1334 | PAE1336 | Possible respiratory chain protein; Energy metabolism; Electron transport. | Possible respiratory chain protein; Energy metabolism; Electron transport. | 0.773 |
PAE1334 | PAE1337 | PAE1334 | PAE1337 | Possible respiratory chain protein; Energy metabolism; Electron transport. | Cytochrome C oxidase subunit I /III; Energy metabolism; Electron transport; Belongs to the heme-copper respiratory oxidase family. | 0.779 |
PAE1334 | PAE1338 | PAE1334 | PAE1338 | Possible respiratory chain protein; Energy metabolism; Electron transport. | Cytochrome C oxidase subunit II; Energy metabolism; Electron transport. | 0.777 |
PAE1334 | PAE1340 | PAE1334 | PAE1340 | Possible respiratory chain protein; Energy metabolism; Electron transport. | Respiratory chain protein (soxI homolog); Energy metabolism; Electron transport. | 0.777 |
PAE1334 | ctaB1 | PAE1334 | PAE1333 | Possible respiratory chain protein; Energy metabolism; Electron transport. | Cytochrome C oxidase assembly factor; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.661 |
PAE1336 | PAE1332 | PAE1336 | PAE1332 | Possible respiratory chain protein; Energy metabolism; Electron transport. | Conserved hypothetical protein. | 0.661 |
PAE1336 | PAE1334 | PAE1336 | PAE1334 | Possible respiratory chain protein; Energy metabolism; Electron transport. | Possible respiratory chain protein; Energy metabolism; Electron transport. | 0.773 |
PAE1336 | PAE1337 | PAE1336 | PAE1337 | Possible respiratory chain protein; Energy metabolism; Electron transport. | Cytochrome C oxidase subunit I /III; Energy metabolism; Electron transport; Belongs to the heme-copper respiratory oxidase family. | 0.773 |
PAE1336 | PAE1338 | PAE1336 | PAE1338 | Possible respiratory chain protein; Energy metabolism; Electron transport. | Cytochrome C oxidase subunit II; Energy metabolism; Electron transport. | 0.773 |
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