Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PAE1390Transport and binding proteins; Amino acids, peptides and amines. (320 aa)    
Predicted Functional Partners:
PAE1389
Transport and binding proteins; Amino acids, peptides and amines.
 
 0.998
PAE1391
Transport and binding proteins; Amino acids, peptides and amines.
 
 
 0.998
PAE1388
Transport and binding proteins; Amino acids, peptides and amines.
 
 0.996
PAE2465
Branched-chain amino acid ABC transporter, ATP-binding protein, putative; Transport and binding proteins; Amino acids, peptides and amines.
 
 0.986
PAE3354
Transport and binding proteins; Amino acids, peptides and amines.
 
 0.985
PAE1392
Transport and binding proteins; Amino acids, peptides and amines.
 
  
 0.983
PAE2083
Transport and binding proteins; Amino acids, peptides and amines.
 
 
 0.983
PAE3269
Branched-chain amino acid ABC transporter, ATP-binding protein, putative; Transport and binding proteins; Amino acids, peptides and amines.
 
 0.983
PAE3350
Transport and binding proteins; Amino acids, peptides and amines.
 
 
 0.983
PAE3348
Transport and binding proteins; Amino acids, peptides and amines.
  
  
  0.974
Your Current Organism:
Pyrobaculum aerophilum
NCBI taxonomy Id: 178306
Other names: P. aerophilum str. IM2, Pyrobaculum aerophilum IM2, Pyrobaculum aerophilum str. IM2, Pyrobaculum aerophilum strain IM2
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