| node1 | node2 | node1 annotation | node2 annotation | score |
| PAE0270 | PAE1433 | Transport and binding proteins; Unknown substrate. | P. aerophilum family 322 protein part 1, authentic frameshift. | 0.451 |
| PAE0270 | PAE1434 | Transport and binding proteins; Unknown substrate. | P. aerophilum family 322 protein part 2, authentic frameshift. | 0.451 |
| PAE0270 | PAE2273 | Transport and binding proteins; Unknown substrate. | Reductase, putative; Energy metabolism; Electron transport. | 0.709 |
| PAE0270 | PAE2336 | Transport and binding proteins; Unknown substrate. | Conserved hypothetical protein. | 0.748 |
| PAE0316 | PAE1433 | ABC-2 type transport system, membrane protein; Transport and binding proteins; Unknown substrate. | P. aerophilum family 322 protein part 1, authentic frameshift. | 0.451 |
| PAE0316 | PAE1434 | ABC-2 type transport system, membrane protein; Transport and binding proteins; Unknown substrate. | P. aerophilum family 322 protein part 2, authentic frameshift. | 0.451 |
| PAE0316 | PAE2273 | ABC-2 type transport system, membrane protein; Transport and binding proteins; Unknown substrate. | Reductase, putative; Energy metabolism; Electron transport. | 0.709 |
| PAE0316 | PAE2336 | ABC-2 type transport system, membrane protein; Transport and binding proteins; Unknown substrate. | Conserved hypothetical protein. | 0.709 |
| PAE1430 | PAE1432 | Hypothetical; Conserved within genome. | P. aerophilum family 321 protein. | 0.516 |
| PAE1430 | PAE1433 | Hypothetical; Conserved within genome. | P. aerophilum family 322 protein part 1, authentic frameshift. | 0.516 |
| PAE1430 | PAE1434 | Hypothetical; Conserved within genome. | P. aerophilum family 322 protein part 2, authentic frameshift. | 0.433 |
| PAE1432 | PAE1430 | P. aerophilum family 321 protein. | Hypothetical; Conserved within genome. | 0.516 |
| PAE1432 | PAE1433 | P. aerophilum family 321 protein. | P. aerophilum family 322 protein part 1, authentic frameshift. | 0.773 |
| PAE1432 | PAE1434 | P. aerophilum family 321 protein. | P. aerophilum family 322 protein part 2, authentic frameshift. | 0.634 |
| PAE1433 | PAE0270 | P. aerophilum family 322 protein part 1, authentic frameshift. | Transport and binding proteins; Unknown substrate. | 0.451 |
| PAE1433 | PAE0316 | P. aerophilum family 322 protein part 1, authentic frameshift. | ABC-2 type transport system, membrane protein; Transport and binding proteins; Unknown substrate. | 0.451 |
| PAE1433 | PAE1430 | P. aerophilum family 322 protein part 1, authentic frameshift. | Hypothetical; Conserved within genome. | 0.516 |
| PAE1433 | PAE1432 | P. aerophilum family 322 protein part 1, authentic frameshift. | P. aerophilum family 321 protein. | 0.773 |
| PAE1433 | PAE1434 | P. aerophilum family 322 protein part 1, authentic frameshift. | P. aerophilum family 322 protein part 2, authentic frameshift. | 0.634 |
| PAE1433 | PAE2273 | P. aerophilum family 322 protein part 1, authentic frameshift. | Reductase, putative; Energy metabolism; Electron transport. | 0.458 |