STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAE1433P. aerophilum family 322 protein part 1, authentic frameshift. (178 aa)    
Predicted Functional Partners:
PAE1432
P. aerophilum family 321 protein.
       0.773
PAE3683
Hypothetical protein.
   
    0.651
PAE1434
P. aerophilum family 322 protein part 2, authentic frameshift.
       0.634
PAE1430
Hypothetical; Conserved within genome.
       0.516
PAE2273
Reductase, putative; Energy metabolism; Electron transport.
  
  
 0.458
PAE2336
Conserved hypothetical protein.
  
  
 0.458
PAE0270
Transport and binding proteins; Unknown substrate.
  
  
 0.451
PAE0316
ABC-2 type transport system, membrane protein; Transport and binding proteins; Unknown substrate.
  
  
 0.451
PAE3065
ABC-2 type transport system, membrane protein; Transport and binding proteins; Unknown substrate.
  
  
 0.451
Your Current Organism:
Pyrobaculum aerophilum
NCBI taxonomy Id: 178306
Other names: P. aerophilum str. IM2, Pyrobaculum aerophilum IM2, Pyrobaculum aerophilum str. IM2, Pyrobaculum aerophilum strain IM2
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