Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
PAE1773H+-transporting ATP synthase subunit I (atpI), conjectural; Energy metabolism; ATP-proton motive force interconversion; Belongs to the V-ATPase 116 kDa subunit family. (767 aa)    
Predicted Functional Partners:
PAE0661
H+-transporting ATP synthase subunit F (atpF); Energy metabolism; ATP-proton motive force interconversion.
  
 0.999
PAE0662
Conserved hypothetical protein.
  
 0.999
atpA
H+-transporting ATP synthase subunit A (atpA); Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal alpha chain is a catalytic subunit; Belongs to the ATPase alpha/beta chains family.
 
 0.999
PAE0753
H+-transporting ATP synthase subunit C (atpC); Energy metabolism; ATP-proton motive force interconversion.
  
 0.999
PAE0754
H+-transporting ATP synthase subunit C (atpC); Energy metabolism; ATP-proton motive force interconversion.
 
 0.999
PAE0758
H+-transporting ATP synthase subunit D (atpD); Energy metabolism; ATP-proton motive force interconversion.
 
 0.999
atpB
H+-transporting ATP synthase subunit B (atpB); Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal beta chain is a regulatory subunit.
 
 0.999
PAE1774
Conserved hypothetical protein.
 
   
 0.829
PAE3333
Conserved hypothetical protein.
    
 0.717
PAE2715
Transport and binding proteins; Cations.
   
 
 0.676
Your Current Organism:
Pyrobaculum aerophilum
NCBI taxonomy Id: 178306
Other names: P. aerophilum str. IM2, Pyrobaculum aerophilum IM2, Pyrobaculum aerophilum str. IM2, Pyrobaculum aerophilum strain IM2
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