Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
PAE1872 | PAE1873 | Isocitrate lyase; Central intermediary metabolism; Other. | Conserved protein with 2 CBS domains; Unclassified. | 0.776 |
PAE1872 | PAE1875 | Isocitrate lyase; Central intermediary metabolism; Other. | paREP7; Hypothetical; Conserved within genome. | 0.752 |
PAE1872 | PAE1876 | Isocitrate lyase; Central intermediary metabolism; Other. | Hypothetical; Conserved within genome. | 0.478 |
PAE1872 | PAE1878 | Isocitrate lyase; Central intermediary metabolism; Other. | ATP binding protein, degenerate; Transport and binding proteins; Unknown substrate. | 0.449 |
PAE1873 | PAE1872 | Conserved protein with 2 CBS domains; Unclassified. | Isocitrate lyase; Central intermediary metabolism; Other. | 0.776 |
PAE1873 | PAE1875 | Conserved protein with 2 CBS domains; Unclassified. | paREP7; Hypothetical; Conserved within genome. | 0.752 |
PAE1873 | PAE1876 | Conserved protein with 2 CBS domains; Unclassified. | Hypothetical; Conserved within genome. | 0.478 |
PAE1875 | PAE1872 | paREP7; Hypothetical; Conserved within genome. | Isocitrate lyase; Central intermediary metabolism; Other. | 0.752 |
PAE1875 | PAE1873 | paREP7; Hypothetical; Conserved within genome. | Conserved protein with 2 CBS domains; Unclassified. | 0.752 |
PAE1875 | PAE1876 | paREP7; Hypothetical; Conserved within genome. | Hypothetical; Conserved within genome. | 0.490 |
PAE1876 | PAE1872 | Hypothetical; Conserved within genome. | Isocitrate lyase; Central intermediary metabolism; Other. | 0.478 |
PAE1876 | PAE1873 | Hypothetical; Conserved within genome. | Conserved protein with 2 CBS domains; Unclassified. | 0.478 |
PAE1876 | PAE1875 | Hypothetical; Conserved within genome. | paREP7; Hypothetical; Conserved within genome. | 0.490 |
PAE1876 | PAE1878 | Hypothetical; Conserved within genome. | ATP binding protein, degenerate; Transport and binding proteins; Unknown substrate. | 0.447 |
PAE1878 | PAE1872 | ATP binding protein, degenerate; Transport and binding proteins; Unknown substrate. | Isocitrate lyase; Central intermediary metabolism; Other. | 0.449 |
PAE1878 | PAE1876 | ATP binding protein, degenerate; Transport and binding proteins; Unknown substrate. | Hypothetical; Conserved within genome. | 0.447 |