STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAE1902Conserved hypothetical protein. (129 aa)    
Predicted Functional Partners:
PAE1903
Conserved hypothetical protein.
   
   0.817
PAE1310
Conserved hypothetical protein.
  
     0.712
PAE2550
Conserved hypothetical protein.
  
     0.653
PAE1153
Conserved hypothetical protein.
 
 
   0.616
PAE1901
paREP8.
       0.546
PAE0168
Conserved hypothetical protein.
  
     0.532
PAE0165
Conserved hypothetical protein.
 
     0.502
vapC3
Conserved hypothetical protein; Toxic component of a type II toxin-antitoxin (TA) system. Has ribonuclease activity; Belongs to the PINc/VapC protein family.
  
     0.476
PAE0210
Conserved hypothetical protein.
  
     0.450
PAE1883
Conserved hypothetical protein.
  
     0.422
Your Current Organism:
Pyrobaculum aerophilum
NCBI taxonomy Id: 178306
Other names: P. aerophilum str. IM2, Pyrobaculum aerophilum IM2, Pyrobaculum aerophilum str. IM2, Pyrobaculum aerophilum strain IM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.