STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAE1936Carbon monoxide dehydrogenase small subunit, conjectural; Energy metabolism; Other. (147 aa)    
Predicted Functional Partners:
PAE1935
Carbon monoxide dehydrogenase large subunit, conjectural; Energy metabolism; Other.
 
 0.999
PAE1939
Carbon monoxide dehydrogenase medium subunit, conjectural; Energy metabolism; Other.
 
 0.997
PAE2478
Molybdopterin binding oxidoreductase large subunit; Energy metabolism; Electron transport.
 
 0.992
PAE1934
Conserved protein; Energy metabolism; Other.
 
  
 0.951
PAE2477
Molybdopterin binding oxidoreductase small and medium subunit; Energy metabolism; Electron transport.
 
 
0.884
PAE2669
Conserved hypothetical protein.
 
  
 0.813
PAE1941
Chorismate mutase, conjectural; Amino acid biosynthesis; Aromatic amino acid family.
       0.705
PAE0727
Molybdenum cofactor biosynthesis protein D/E; Biosynthesis of cofactors, prosthetic groups, and carriers; Molybdopterin.
     
 0.659
PAE1943
paREP5; Hypothetical; Conserved within genome.
       0.513
pyrC
Dihydroorotase (pyrC); Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.
  
  
 0.510
Your Current Organism:
Pyrobaculum aerophilum
NCBI taxonomy Id: 178306
Other names: P. aerophilum str. IM2, Pyrobaculum aerophilum IM2, Pyrobaculum aerophilum str. IM2, Pyrobaculum aerophilum strain IM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.