STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAE1949paREP11. (85 aa)    
Predicted Functional Partners:
PAE1951
Conserved hypothetical protein.
   
   0.678
PAE1944
Hypothetical protein.
       0.590
PAE1946
Hypothetical protein.
       0.590
PAE1948
P. aerophilum family 453, possible regulatory protein; Regulatory functions; General.
       0.590
PAE1954
Hypothetical protein.
       0.501
PAE1955
Hypothetical protein.
       0.501
PAE1943
paREP5; Hypothetical; Conserved within genome.
       0.486
PAE1956
Hypothetical protein.
       0.445
PAE1957
Hypothetical protein.
       0.445
PAE0028
paREP11.
    
  0.408
Your Current Organism:
Pyrobaculum aerophilum
NCBI taxonomy Id: 178306
Other names: P. aerophilum str. IM2, Pyrobaculum aerophilum IM2, Pyrobaculum aerophilum str. IM2, Pyrobaculum aerophilum strain IM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.