STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAE1999Conserved hypothetical protein. (130 aa)    
Predicted Functional Partners:
PAE1998
Hypothetical protein.
       0.734
PAE2000
Glutamine transport system permease protein, putative; Transport and binding proteins; Amino acids, peptides and amines.
       0.572
PAE2001
Glutamine transport ATP-binding; Transport and binding proteins; Amino acids, peptides and amines.
       0.572
PAE2002
Molybdopterin oxidoreductase; Energy metabolism; Electron transport.
       0.539
PAE1270
Conserved hypothetical protein.
  
     0.476
PAE2003
Conserved hypothetical protein.
       0.470
PAE2004
Serine/threonine specific protein phosphatase; Regulatory functions; General.
       0.470
ef1b
Translation elongation factor aEF-1 beta subunit; Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA.
  
     0.457
PAE2695
Hypothetical; Conserved within genome.
  
     0.447
PAE3429
Glycogen synthase (starch (bacterial glycogen) synthase), putative; Energy metabolism; Biosynthesis and degradation of polysaccharides.
  
     0.410
Your Current Organism:
Pyrobaculum aerophilum
NCBI taxonomy Id: 178306
Other names: P. aerophilum str. IM2, Pyrobaculum aerophilum IM2, Pyrobaculum aerophilum str. IM2, Pyrobaculum aerophilum strain IM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.