Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PAE2002Molybdopterin oxidoreductase; Energy metabolism; Electron transport. (619 aa)    
Predicted Functional Partners:
PAE2860
Molybdopterin oxidoreductase, iron-sulfur binding subunit; Energy metabolism; Electron transport.
 
 
 0.784
PAE2837
Molybdopterin oxidoreductase, iron-sulfur binding subunit; Energy metabolism; Electron transport.
 
 
 0.780
PAE1263
Molybdopterin oxidoreductase, iron-sulfur binding subunit; Energy metabolism; Electron transport.
 
 
 0.773
PAE2661
Formate dehydrogenase beta subunit; Energy metabolism; Electron transport.
 
 
 0.760
PAE2001
Glutamine transport ATP-binding; Transport and binding proteins; Amino acids, peptides and amines.
     
 0.727
PAE2000
Glutamine transport system permease protein, putative; Transport and binding proteins; Amino acids, peptides and amines.
     
 0.723
PAE2003
Conserved hypothetical protein.
     
 0.717
PAE2004
Serine/threonine specific protein phosphatase; Regulatory functions; General.
       0.709
PAE1349
Rieske iron sulfur protein (parR); Energy metabolism; Electron transport.
   
 
 0.617
PAE1999
Conserved hypothetical protein.
       0.539
Your Current Organism:
Pyrobaculum aerophilum
NCBI taxonomy Id: 178306
Other names: P. aerophilum str. IM2, Pyrobaculum aerophilum IM2, Pyrobaculum aerophilum str. IM2, Pyrobaculum aerophilum strain IM2
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