STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAE2159Conserved hypothetical protein. (453 aa)    
Predicted Functional Partners:
PAE0723
Ferredoxin like protein; Energy metabolism; Electron transport.
 
 
 0.832
ribK
Conserved hypothetical protein; Catalyzes the CTP-dependent phosphorylation of riboflavin (vitamin B2) to form flavin mononucleotide (FMN); Belongs to the archaeal riboflavin kinase family.
 
     0.750
PAE0722
Electron transfer flavoprotein beta subunit (etfB); Energy metabolism; Electron transport.
 
 
 0.742
PAE2158
Fuculose-1-phosphate aldolase (fucA); Energy metabolism; Sugars.
  
    0.715
PAE2160
Conserved hypothetical protein; Belongs to the UPF0173 family.
       0.705
PAE3586
Electron transfer flavoprotein beta subunit (etfB); Energy metabolism; Electron transport.
  
 
 0.702
PAE2989
Conserved hypothetical protein.
  
     0.684
PAE2155
Hypothetical; Conserved within genome.
       0.657
hjc
Holliday Junction Resolvase; A structure-specific endonuclease that resolves Holliday junction (HJ) intermediates during genetic recombination. Cleaves 4-way DNA junctions introducing paired nicks in opposing strands, leaving a 5'-terminal phosphate and a 3'-terminal hydroxyl group that are ligated to produce recombinant products; Belongs to the Holliday junction resolvase Hjc family.
 
     0.645
PAE2154
Hypothetical protein.
       0.644
Your Current Organism:
Pyrobaculum aerophilum
NCBI taxonomy Id: 178306
Other names: P. aerophilum str. IM2, Pyrobaculum aerophilum IM2, Pyrobaculum aerophilum str. IM2, Pyrobaculum aerophilum strain IM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.