STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAE2176CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (pgsA); Fatty acid and phospholipid metabolism; Biosynthesis; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (180 aa)    
Predicted Functional Partners:
PAE1761
Myo-inositol-1-phosphate synthase, conjectural; Fatty acid and phospholipid metabolism; Other.
 
   
 0.826
PAE0875
Competence damage protein, conjectural; DNA metabolism; DNA replication, recombination, and repair; Belongs to the CinA family.
  
  
 0.808
PAE2177
Conserved hypothetical protein.
       0.741
PAE0683
Cytidyltransferase; Unclassified.
  
  
 0.696
trmY
Hypothetical protein; Specifically catalyzes the N1-methylation of pseudouridine at position 54 (Psi54) in tRNAs; Belongs to the methyltransferase superfamily. TrmY family.
       0.687
PAE0727
Molybdenum cofactor biosynthesis protein D/E; Biosynthesis of cofactors, prosthetic groups, and carriers; Molybdopterin.
 
    0.652
PAE1058
Glycerophosphoryl diester phosphodiesterase; Fatty acid and phospholipid metabolism; Degradation.
 
 
 
 0.633
PAE1536
Conserved protein (possible dual specificity phosphatase); Unclassified.
  
 
 0.613
uppS
Conserved hypothetical protein; Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with geranylgeranyl diphosphate (GGPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30E,34E,38E)-undecaprenyl diphosphate (tritrans,heptacis-UPP). It is probably the precursor of glycosyl carrier lipids.
  
 
 0.613
PAE0371
Conserved hypothetical protein.
     
 0.610
Your Current Organism:
Pyrobaculum aerophilum
NCBI taxonomy Id: 178306
Other names: P. aerophilum str. IM2, Pyrobaculum aerophilum IM2, Pyrobaculum aerophilum str. IM2, Pyrobaculum aerophilum strain IM2
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