STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAE2286ABC transporter ATP-binding protein, putative; Transport and binding proteins; Unknown substrate. (254 aa)    
Predicted Functional Partners:
PAE2288
Conserved hypothetical protein.
 
 
 0.971
PAE3684
Conserved hypothetical protein.
 
 
 0.868
PAE3663
Conserved hypothetical protein.
 
 
 0.867
PAE0039
Conserved hypothetical protein.
 
 
 0.859
PAE2285
Hypothetical protein.
       0.843
PAE2290
Membrane protein, putative; Transport and binding proteins; Unknown substrate.
       0.595
rps5
Ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy.
 
   
 0.545
PAE2291
Hypothetical protein.
       0.543
hisS
histidyl-tRNA synthetase; Protein synthesis; tRNA aminoacylation; Belongs to the class-II aminoacyl-tRNA synthetase family.
 
   
 0.534
rpl14
Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
 
     0.524
Your Current Organism:
Pyrobaculum aerophilum
NCBI taxonomy Id: 178306
Other names: P. aerophilum str. IM2, Pyrobaculum aerophilum IM2, Pyrobaculum aerophilum str. IM2, Pyrobaculum aerophilum strain IM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.