STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAE2338Ubiquinone/menaquinone biosynthesis methyltransferase (ubiE), conjectural; Biosynthesis of cofactors, prosthetic groups, and carriers; Menaquinone and ubiquinone. (227 aa)    
Predicted Functional Partners:
PAE2337
Hypothetical protein.
       0.793
PAE2336
Conserved hypothetical protein.
       0.585
PAE1013
Polyprenyl synthetase; Unclassified; Belongs to the FPP/GGPP synthase family.
 
 
 0.484
PAE1349
Rieske iron sulfur protein (parR); Energy metabolism; Electron transport.
   
  
 0.478
PAE2743
Fumarate hydratase class II; Energy metabolism; TCA cycle.
  
  
 0.415
PAE3294
Polyprenyl synthetase; Unclassified; Belongs to the FPP/GGPP synthase family.
  
 
 0.412
Your Current Organism:
Pyrobaculum aerophilum
NCBI taxonomy Id: 178306
Other names: P. aerophilum str. IM2, Pyrobaculum aerophilum IM2, Pyrobaculum aerophilum str. IM2, Pyrobaculum aerophilum strain IM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.