STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAE2355Glycosyl transferase; Unclassified. (354 aa)    
Predicted Functional Partners:
PAE2354
Hypothetical protein.
       0.793
PAE2983
Conserved hypothetical protein.
  
  
 0.728
PAE1266
Conserved hypothetical protein.
 
     0.551
PAE2357
Hypothetical protein.
       0.549
PAE2352
RNase L inhibitor homolog; Unclassified.
       0.525
PAE0297
Conserved hypothetical protein.
 
     0.504
PAE3631
NAD dependent epimerase/dehydratase, putative; Purines, pyrimidines, nucleosides, and nucleotides; Sugar-nucleotide biosynthesis and conversions.
 
 
 0.486
PAE2358
Hypothetical protein.
       0.485
PAE3468
Conserved hypothetical protein.
 
     0.474
PAE1861
Hypothetical protein with 4 ankyrin repeats; Unclassified.
  
 
 0.454
Your Current Organism:
Pyrobaculum aerophilum
NCBI taxonomy Id: 178306
Other names: P. aerophilum str. IM2, Pyrobaculum aerophilum IM2, Pyrobaculum aerophilum str. IM2, Pyrobaculum aerophilum strain IM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.