Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| PAE0665 | PAE2085 | DNA-directed RNA polymerase subunit B (rpoB); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Peroxiredoxin, probable; Cellular processes; Toxin production and resistance. | 0.497 |
| PAE0665 | PAE2374 | DNA-directed RNA polymerase subunit B (rpoB); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Hypothetical protein. | 0.723 |
| PAE0665 | PAE2623 | DNA-directed RNA polymerase subunit B (rpoB); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Mercuric reductase; Cellular processes; Toxin production and resistance; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family. | 0.478 |
| PAE0665 | PAE2649 | DNA-directed RNA polymerase subunit B (rpoB); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Pyruvate dehydrogenase E3 (dihydrolipoamide dehydrogenase); Energy metabolism; Glycolysis/gluconeogenesis. | 0.402 |
| PAE0665 | PAE3155 | DNA-directed RNA polymerase subunit B (rpoB); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Ribonucleotide reductase; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen. | 0.578 |
| PAE0665 | PAE3333 | DNA-directed RNA polymerase subunit B (rpoB); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Conserved hypothetical protein. | 0.728 |
| PAE1358 | PAE2374 | senC homolog; Energy metabolism; Electron transport. | Hypothetical protein. | 0.725 |
| PAE1725 | PAE2085 | Thioredoxin reductase (trxB); Purines, pyrimidines, nucleosides, and nucleotides; 2'-Deoxyribonucleotide metabolism. | Peroxiredoxin, probable; Cellular processes; Toxin production and resistance. | 0.872 |
| PAE1725 | PAE2374 | Thioredoxin reductase (trxB); Purines, pyrimidines, nucleosides, and nucleotides; 2'-Deoxyribonucleotide metabolism. | Hypothetical protein. | 0.729 |
| PAE1725 | PAE2623 | Thioredoxin reductase (trxB); Purines, pyrimidines, nucleosides, and nucleotides; 2'-Deoxyribonucleotide metabolism. | Mercuric reductase; Cellular processes; Toxin production and resistance; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family. | 0.525 |
| PAE1725 | PAE2649 | Thioredoxin reductase (trxB); Purines, pyrimidines, nucleosides, and nucleotides; 2'-Deoxyribonucleotide metabolism. | Pyruvate dehydrogenase E3 (dihydrolipoamide dehydrogenase); Energy metabolism; Glycolysis/gluconeogenesis. | 0.557 |
| PAE1725 | PAE2744 | Thioredoxin reductase (trxB); Purines, pyrimidines, nucleosides, and nucleotides; 2'-Deoxyribonucleotide metabolism. | Thioredoxin reductase (trxB); Purines, pyrimidines, nucleosides, and nucleotides; 2'-Deoxyribonucleotide metabolism. | 0.908 |
| PAE2085 | PAE0665 | Peroxiredoxin, probable; Cellular processes; Toxin production and resistance. | DNA-directed RNA polymerase subunit B (rpoB); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.497 |
| PAE2085 | PAE1725 | Peroxiredoxin, probable; Cellular processes; Toxin production and resistance. | Thioredoxin reductase (trxB); Purines, pyrimidines, nucleosides, and nucleotides; 2'-Deoxyribonucleotide metabolism. | 0.872 |
| PAE2085 | PAE2374 | Peroxiredoxin, probable; Cellular processes; Toxin production and resistance. | Hypothetical protein. | 0.940 |
| PAE2085 | PAE2623 | Peroxiredoxin, probable; Cellular processes; Toxin production and resistance. | Mercuric reductase; Cellular processes; Toxin production and resistance; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family. | 0.458 |
| PAE2085 | PAE2649 | Peroxiredoxin, probable; Cellular processes; Toxin production and resistance. | Pyruvate dehydrogenase E3 (dihydrolipoamide dehydrogenase); Energy metabolism; Glycolysis/gluconeogenesis. | 0.458 |
| PAE2085 | PAE2744 | Peroxiredoxin, probable; Cellular processes; Toxin production and resistance. | Thioredoxin reductase (trxB); Purines, pyrimidines, nucleosides, and nucleotides; 2'-Deoxyribonucleotide metabolism. | 0.872 |
| PAE2374 | PAE0665 | Hypothetical protein. | DNA-directed RNA polymerase subunit B (rpoB); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.723 |
| PAE2374 | PAE1358 | Hypothetical protein. | senC homolog; Energy metabolism; Electron transport. | 0.725 |
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