STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAE2450Ferredoxin; Energy metabolism; Fermentation. (108 aa)    
Predicted Functional Partners:
PAE2451
Pyruvate formate-lyase activating enzyme homolog; Protein fate; Protein modification and repair.
       0.692
PAE3613
Nitrate reductase subunit, conjectural; Energy metabolism; Electron transport.
  
     0.601
PAE2449
Conserved hypothetical protein.
       0.558
PAE0600
Conserved hypothetical protein.
 
     0.522
PAE2138
Conserved hypothetical protein.
  
     0.486
PAE2701
Conserved hypothetical protein; Protects DNA from oxidative damage by sequestering intracellular Fe2+ ion and storing it in the form of Fe3+ oxyhydroxide mineral. One hydrogen peroxide oxidizes two Fe2+ ions, which prevents hydroxyl radical production by the Fenton reaction. Belongs to the Dps family.
  
     0.477
PAE0017
Conserved hypothetical protein.
  
     0.457
PAE3169
Conserved protein with 7 CBS domains; Unclassified.
 
     0.411
PAE0210
Conserved hypothetical protein.
  
     0.404
Your Current Organism:
Pyrobaculum aerophilum
NCBI taxonomy Id: 178306
Other names: P. aerophilum str. IM2, Pyrobaculum aerophilum IM2, Pyrobaculum aerophilum str. IM2, Pyrobaculum aerophilum strain IM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.