STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAE2467Fatty acid co-A racemase, conjectural; Fatty acid and phospholipid metabolism; Degradation. (301 aa)    
Predicted Functional Partners:
PAE2469
Conserved hypothetical protein.
       0.799
PAE2466
long-chain-fatty-acid--CoA ligase; Fatty acid and phospholipid metabolism; Degradation.
 
  
 0.735
PAE2471
acetyl-CoA C-acyltransferase; Fatty acid and phospholipid metabolism; Degradation.
 
  
 0.677
PAE2464
ABC transporter ATP-binding component; Transport and binding proteins; Amino acids, peptides and amines.
 
 
 0.643
PAE2333
Medium-chain acyl-CoA ligase; Fatty acid and phospholipid metabolism; Degradation.
 
  
 0.633
PAE3300
Acetolactate synthase large subunit (ilvB); Amino acid biosynthesis; Pyruvate family.
  
 
 0.568
PAE2070
acyl-CoA dehydrogenase; Fatty acid and phospholipid metabolism; Degradation.
 
 
 0.541
PAE2475
acyl-CoA dehydrogenase; Fatty acid and phospholipid metabolism; Degradation.
 
 
 0.532
PAE1378
acyl-CoA dehydrogenase; Fatty acid and phospholipid metabolism; Degradation.
 
 
 0.527
PAE2491
acyl-CoA dehydrogenase; Fatty acid and phospholipid metabolism; Degradation.
 
 
 0.526
Your Current Organism:
Pyrobaculum aerophilum
NCBI taxonomy Id: 178306
Other names: P. aerophilum str. IM2, Pyrobaculum aerophilum IM2, Pyrobaculum aerophilum str. IM2, Pyrobaculum aerophilum strain IM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.