STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAE2469Conserved hypothetical protein. (131 aa)    
Predicted Functional Partners:
PAE2467
Fatty acid co-A racemase, conjectural; Fatty acid and phospholipid metabolism; Degradation.
       0.799
PAE2466
long-chain-fatty-acid--CoA ligase; Fatty acid and phospholipid metabolism; Degradation.
 
  
 0.728
PAE2464
ABC transporter ATP-binding component; Transport and binding proteins; Amino acids, peptides and amines.
  
  
 0.722
queC
Conserved hypothetical protein; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family.
 
 
 
 0.602
PAE2471
acetyl-CoA C-acyltransferase; Fatty acid and phospholipid metabolism; Degradation.
  
  
 0.579
ilvD
Dihydroxy-acid dehydratase (ilvD); Amino acid biosynthesis; Pyruvate family; Belongs to the IlvD/Edd family.
  
  
 0.566
PAE1383
3-hydroxyacyl-CoA dehydrogenase and enoyl-CoA hydratase; Fatty acid and phospholipid metabolism; Degradation.
 
   
 0.544
PAE0025
Short chain dehydrogenase; Unclassified.
  
 
 0.537
PAE0797
Short chain dehydrogenase; Unclassified.
  
 
 0.537
PAE1589
3-oxoacyl-(acyl carrier protein) reductase; Fatty acid and phospholipid metabolism; Biosynthesis.
  
 
 0.537
Your Current Organism:
Pyrobaculum aerophilum
NCBI taxonomy Id: 178306
Other names: P. aerophilum str. IM2, Pyrobaculum aerophilum IM2, Pyrobaculum aerophilum str. IM2, Pyrobaculum aerophilum strain IM2
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