Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PAE2603Conserved protein with C terminal acylphosphatase domain; Unclassified. (568 aa)    
Predicted Functional Partners:
PAE2602
Conserved hypothetical protein.
 
     0.834
PAE2604
Conserved hypothetical protein.
       0.786
PAE2601
Conserved hypothetical protein.
       0.555
PAE2600
Hypothetical protein.
       0.535
PAE3429
Glycogen synthase (starch (bacterial glycogen) synthase), putative; Energy metabolism; Biosynthesis and degradation of polysaccharides.
  
     0.497
PAE3573
Conserved hypothetical protein.
  
     0.479
PAE3422
Conserved hypothetical protein.
  
   
 0.473
PAE0171
Conserved hypothetical protein.
  
     0.470
PAE0879
Conserved hypothetical protein.
  
     0.451
PAE1543
Conserved hypothetical protein.
 
     0.441
Your Current Organism:
Pyrobaculum aerophilum
NCBI taxonomy Id: 178306
Other names: P. aerophilum str. IM2, Pyrobaculum aerophilum IM2, Pyrobaculum aerophilum str. IM2, Pyrobaculum aerophilum strain IM2
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