STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAE2661Formate dehydrogenase beta subunit; Energy metabolism; Electron transport. (281 aa)    
Predicted Functional Partners:
PAE2662
Formate dehydrogenase alpha subunit; Energy metabolism; Electron transport.
 
 0.997
PAE2660
Hypothetical protein.
    
  0.972
PAE2840
Molybdopterin oxidoreductase, molybdopterin binding subunit part 1, authentic frameshift; Energy metabolism; Electron transport.
 
 
 0.916
PAE2859
Molybdopterin oxidoreductase, molybdopterin binding subunit; Energy metabolism; Electron transport.
 
 0.905
PAE2002
Molybdopterin oxidoreductase; Energy metabolism; Electron transport.
 
 0.832
PAE1265
Molybdopterin oxidoreductase, molybdopterin binding subunit; Energy metabolism; Electron transport.
 
 
 0.831
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily.
    
 0.822
PAE2659
Formate dehydrogenase protein fdhE; Energy metabolism; Electron transport.
  
  
 0.815
PAE1688
Malate oxidoreductase (mae); Energy metabolism; Other.
    
 0.807
PAE2131
Fumarate hydratase class I beta subunit; Energy metabolism; TCA cycle.
    
 0.805
Your Current Organism:
Pyrobaculum aerophilum
NCBI taxonomy Id: 178306
Other names: P. aerophilum str. IM2, Pyrobaculum aerophilum IM2, Pyrobaculum aerophilum str. IM2, Pyrobaculum aerophilum strain IM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.