Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
PAE2705 | PAE2706 | Hypothetical protein. | Ferredoxin oxidoreductase, conjectural; Energy metabolism; Fermentation. | 0.773 |
PAE2705 | PAE2707 | Hypothetical protein. | Hypothetical protein. | 0.584 |
PAE2705 | PAE2708 | Hypothetical protein. | Hypothetical protein. | 0.584 |
PAE2705 | PAE2711a | Hypothetical protein. | Conserved hypothetical protein. | 0.584 |
PAE2705 | PAE2712 | Hypothetical protein. | Conserved hypothetical protein. | 0.467 |
PAE2706 | PAE2705 | Ferredoxin oxidoreductase, conjectural; Energy metabolism; Fermentation. | Hypothetical protein. | 0.773 |
PAE2706 | PAE2707 | Ferredoxin oxidoreductase, conjectural; Energy metabolism; Fermentation. | Hypothetical protein. | 0.584 |
PAE2706 | PAE2708 | Ferredoxin oxidoreductase, conjectural; Energy metabolism; Fermentation. | Hypothetical protein. | 0.584 |
PAE2706 | PAE2711a | Ferredoxin oxidoreductase, conjectural; Energy metabolism; Fermentation. | Conserved hypothetical protein. | 0.587 |
PAE2706 | PAE2712 | Ferredoxin oxidoreductase, conjectural; Energy metabolism; Fermentation. | Conserved hypothetical protein. | 0.472 |
PAE2707 | PAE2705 | Hypothetical protein. | Hypothetical protein. | 0.584 |
PAE2707 | PAE2706 | Hypothetical protein. | Ferredoxin oxidoreductase, conjectural; Energy metabolism; Fermentation. | 0.584 |
PAE2707 | PAE2708 | Hypothetical protein. | Hypothetical protein. | 0.773 |
PAE2707 | PAE2711a | Hypothetical protein. | Conserved hypothetical protein. | 0.773 |
PAE2707 | PAE2712 | Hypothetical protein. | Conserved hypothetical protein. | 0.608 |
PAE2707 | PAE2713 | Hypothetical protein. | 4a-hydroxytetrahydrobiopterin dehydratase; Biosynthesis of cofactors, prosthetic groups, and carriers; Other. | 0.459 |
PAE2707 | PAE2715 | Hypothetical protein. | Transport and binding proteins; Cations. | 0.459 |
PAE2708 | PAE2705 | Hypothetical protein. | Hypothetical protein. | 0.584 |
PAE2708 | PAE2706 | Hypothetical protein. | Ferredoxin oxidoreductase, conjectural; Energy metabolism; Fermentation. | 0.584 |
PAE2708 | PAE2707 | Hypothetical protein. | Hypothetical protein. | 0.773 |
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