Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PAE2755 | PAE2756 | PAE2755 | PAE2756 | Hypothetical protein. | Conserved within P. aerophilum, degenerate; Hypothetical; Conserved within genome. | 0.535 |
PAE2755 | PAE2758 | PAE2755 | PAE2758 | Hypothetical protein. | Cation-transporting ATPase (P-type); Transport and binding proteins; Cations. | 0.415 |
PAE2755 | vapC9 | PAE2755 | PAE2754 | Hypothetical protein. | Conserved hypothetical protein; Toxic component of a type II toxin-antitoxin (TA) system (By similarity). Has ribonuclease activity. Has a slow ssDNA exonuclease activity; Belongs to the PINc/VapC protein family. | 0.847 |
PAE2756 | PAE2755 | PAE2756 | PAE2755 | Conserved within P. aerophilum, degenerate; Hypothetical; Conserved within genome. | Hypothetical protein. | 0.535 |
PAE2756 | PAE2758 | PAE2756 | PAE2758 | Conserved within P. aerophilum, degenerate; Hypothetical; Conserved within genome. | Cation-transporting ATPase (P-type); Transport and binding proteins; Cations. | 0.581 |
PAE2756 | vapC9 | PAE2756 | PAE2754 | Conserved within P. aerophilum, degenerate; Hypothetical; Conserved within genome. | Conserved hypothetical protein; Toxic component of a type II toxin-antitoxin (TA) system (By similarity). Has ribonuclease activity. Has a slow ssDNA exonuclease activity; Belongs to the PINc/VapC protein family. | 0.535 |
PAE2758 | PAE2755 | PAE2758 | PAE2755 | Cation-transporting ATPase (P-type); Transport and binding proteins; Cations. | Hypothetical protein. | 0.415 |
PAE2758 | PAE2756 | PAE2758 | PAE2756 | Cation-transporting ATPase (P-type); Transport and binding proteins; Cations. | Conserved within P. aerophilum, degenerate; Hypothetical; Conserved within genome. | 0.581 |
PAE2758 | vapC9 | PAE2758 | PAE2754 | Cation-transporting ATPase (P-type); Transport and binding proteins; Cations. | Conserved hypothetical protein; Toxic component of a type II toxin-antitoxin (TA) system (By similarity). Has ribonuclease activity. Has a slow ssDNA exonuclease activity; Belongs to the PINc/VapC protein family. | 0.415 |
vapC9 | PAE2755 | PAE2754 | PAE2755 | Conserved hypothetical protein; Toxic component of a type II toxin-antitoxin (TA) system (By similarity). Has ribonuclease activity. Has a slow ssDNA exonuclease activity; Belongs to the PINc/VapC protein family. | Hypothetical protein. | 0.847 |
vapC9 | PAE2756 | PAE2754 | PAE2756 | Conserved hypothetical protein; Toxic component of a type II toxin-antitoxin (TA) system (By similarity). Has ribonuclease activity. Has a slow ssDNA exonuclease activity; Belongs to the PINc/VapC protein family. | Conserved within P. aerophilum, degenerate; Hypothetical; Conserved within genome. | 0.535 |
vapC9 | PAE2758 | PAE2754 | PAE2758 | Conserved hypothetical protein; Toxic component of a type II toxin-antitoxin (TA) system (By similarity). Has ribonuclease activity. Has a slow ssDNA exonuclease activity; Belongs to the PINc/VapC protein family. | Cation-transporting ATPase (P-type); Transport and binding proteins; Cations. | 0.415 |