STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAE2758Cation-transporting ATPase (P-type); Transport and binding proteins; Cations. (789 aa)    
Predicted Functional Partners:
PAE2715
Transport and binding proteins; Cations.
 
  
 0.843
PAE2746
Protein synthesis; Ribosomal proteins: synthesis and modification.
 
   
 0.838
PAE1888
Multicopper oxidase; Unclassified.
 
  
 0.763
PAE2374
Hypothetical protein.
   
 
 0.685
PAE2759
Conserved hypothetical protein.
       0.646
PAE1246
Manganese ABC transporter ATP-binding protein; Transport and binding proteins; Cations.
     
 0.610
PAE0564
Conserved hypothetical protein.
     
 0.608
PAE2760
paREP11.
       0.604
PAE0727
Molybdenum cofactor biosynthesis protein D/E; Biosynthesis of cofactors, prosthetic groups, and carriers; Molybdopterin.
  
  
 0.594
PAE0731
Transcriptional regulatory protein, conjectural; Regulatory functions; General.
     
 0.594
Your Current Organism:
Pyrobaculum aerophilum
NCBI taxonomy Id: 178306
Other names: P. aerophilum str. IM2, Pyrobaculum aerophilum IM2, Pyrobaculum aerophilum str. IM2, Pyrobaculum aerophilum strain IM2
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