Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
PAE2826Polyferredoxin; Energy metabolism; Electron transport. (370 aa)    
Predicted Functional Partners:
PAE2827
coA transferase, putative; Unclassified.
       0.693
PAE2861
Molybdopterin oxidoreductase, membrane subunit; Energy metabolism; Electron transport.
 
   
 0.654
PAE0020
Binding protein, putative; Transport and binding proteins; Anions.
  
     0.567
PAE0022
Sulfate transport system, permease protein, putative; Transport and binding proteins; Anions.
  
     0.534
PAE1263
Molybdopterin oxidoreductase, iron-sulfur binding subunit; Energy metabolism; Electron transport.
 
   
 0.510
PAE2828
Conserved hypothetical protein.
       0.481
vapC-3
Conserved hypothetical protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
       0.481
PAE2837
Molybdopterin oxidoreductase, iron-sulfur binding subunit; Energy metabolism; Electron transport.
 
   
 0.439
PAE2860
Molybdopterin oxidoreductase, iron-sulfur binding subunit; Energy metabolism; Electron transport.
 
   
 0.434
PAE3443
Glutamate synthase subunit, conjectural; Amino acid biosynthesis; Glutamate family.
 
     0.420
Your Current Organism:
Pyrobaculum aerophilum
NCBI taxonomy Id: 178306
Other names: P. aerophilum str. IM2, Pyrobaculum aerophilum IM2, Pyrobaculum aerophilum str. IM2, Pyrobaculum aerophilum strain IM2
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