Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PAE2890Transport and binding proteins; Amino acids, peptides and amines. (323 aa)    
Predicted Functional Partners:
PAE2891
Transport and binding proteins; Amino acids, peptides and amines.
 
 
 0.984
PAE2893
Transport and binding proteins; Amino acids, peptides and amines.
 
 
 0.984
PAE1246
Manganese ABC transporter ATP-binding protein; Transport and binding proteins; Cations.
  
  
 
0.913
PAE0953
Putrescine/spermidine binding protein, conjectural; Transport and binding proteins; Amino acids, peptides and amines.
 
  
 0.897
PAE0062
Molybdenum transport system permease protein, putative; Transport and binding proteins; Anions.
 
    0.641
PAE1222
ABC transporter ATP-binding protein, putative; Transport and binding proteins; Unknown substrate.
 
 
 
0.610
cysS
cysteinyl-tRNA synthetase; Protein synthesis; tRNA aminoacylation.
 
    0.603
PAE1321
Multiple sugar-binding transport ATP-binding; Transport and binding proteins; Carbohydrates, organic alcohols, and acids.
 
 
 
0.603
PAE3455
Maltose ABC transporter, maltose binding protein; Transport and binding proteins; Carbohydrates, organic alcohols, and acids.
    
 0.585
PAE2889
Conserved hypothetical protein.
       0.554
Your Current Organism:
Pyrobaculum aerophilum
NCBI taxonomy Id: 178306
Other names: P. aerophilum str. IM2, Pyrobaculum aerophilum IM2, Pyrobaculum aerophilum str. IM2, Pyrobaculum aerophilum strain IM2
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