STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAE2895Conserved hypothetical protein, authentic frameshift. (359 aa)    
Predicted Functional Partners:
PAE3249
Conserved hypothetical protein.
 
 
 0.993
PAE2897
Hypothetical; Conserved within genome.
       0.775
PAE2898
Conserved protein with 2 CBS domains; Unclassified.
   
   0.742
PAE2901
Conserved hypothetical protein.
       0.640
PAE2899
Conserved hypothetical protein.
       0.635
PAE2904
Exonuclease sbcD, conjectural; DNA metabolism; DNA replication, recombination, and repair.
       0.480
PAE2905
Purine NTPase, probable; Unclassified.
       0.454
PAE2903
Conserved hypothetical protein.
       0.446
PAE2902
Hypothetical protein.
       0.437
PAE1042
Pyruvate ferredoxin oxidoreductase alpha subunit (porA); Energy metabolism; Fermentation.
  
 
 0.432
Your Current Organism:
Pyrobaculum aerophilum
NCBI taxonomy Id: 178306
Other names: P. aerophilum str. IM2, Pyrobaculum aerophilum IM2, Pyrobaculum aerophilum str. IM2, Pyrobaculum aerophilum strain IM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.