STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAE2902Hypothetical protein. (423 aa)    
Predicted Functional Partners:
PAE2903
Conserved hypothetical protein.
   
 
 0.965
PAE2905
Purine NTPase, probable; Unclassified.
     
 0.891
PAE2904
Exonuclease sbcD, conjectural; DNA metabolism; DNA replication, recombination, and repair.
       0.874
PAE2998
Conserved hypothetical protein.
   
 
 0.831
PAE3204
Hypothetical protein.
   
 
 0.825
PAE0128
Conserved hypothetical protein.
   
 
 0.735
PAE2155
Hypothetical; Conserved within genome.
   
 
 0.735
PAE3527
Conserved hypothetical protein.
   
 
 0.735
PAE0245
Conserved hypothetical protein.
   
 
 0.723
PAE2197
Predicted phosphoesterase; Unclassified.
   
    0.564
Your Current Organism:
Pyrobaculum aerophilum
NCBI taxonomy Id: 178306
Other names: P. aerophilum str. IM2, Pyrobaculum aerophilum IM2, Pyrobaculum aerophilum str. IM2, Pyrobaculum aerophilum strain IM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.