STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAE3208Helix-turn-helix protein; Unclassified. (516 aa)    
Predicted Functional Partners:
PAE3209
Conserved hypothetical protein.
  
    0.801
guaA
GMP synthetase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
     
 0.594
PAE0953
Putrescine/spermidine binding protein, conjectural; Transport and binding proteins; Amino acids, peptides and amines.
 
   
 0.548
PAE2891
Transport and binding proteins; Amino acids, peptides and amines.
 
  
 0.464
PAE2893
Transport and binding proteins; Amino acids, peptides and amines.
 
     0.445
PAE3513
Resolvase, conjectural; DNA metabolism; DNA replication, recombination, and repair.
 
  
 0.437
PAE2679
Transcriptional regulator, conjectural; Cellular processes; Toxin production and resistance.
 
 
 0.430
PAE2316
Threonine dehydratase (ilvA); Amino acid biosynthesis; Pyruvate family.
 
  
 0.428
PAE1717
Propionate catabolism protein prpD; Central intermediary metabolism; Other.
  
  
 0.410
PAE2469
Conserved hypothetical protein.
  
  
 0.407
Your Current Organism:
Pyrobaculum aerophilum
NCBI taxonomy Id: 178306
Other names: P. aerophilum str. IM2, Pyrobaculum aerophilum IM2, Pyrobaculum aerophilum str. IM2, Pyrobaculum aerophilum strain IM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.