STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAE3454Pullulanase; Cell envelope; Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides. (999 aa)    
Predicted Functional Partners:
PAE3455
Maltose ABC transporter, maltose binding protein; Transport and binding proteins; Carbohydrates, organic alcohols, and acids.
 
   
 0.755
PAE3457
Maltose ABC transporter, permease protein; Transport and binding proteins; Carbohydrates, organic alcohols, and acids.
       0.704
PAE3456
Maltose ABC transporter, permease protein; Transport and binding proteins; Carbohydrates, organic alcohols, and acids.
       0.693
PAE3453
Molybdopterin-guanine dinucleotide biosynthesis protein A; Biosynthesis of cofactors, prosthetic groups, and carriers; Molybdopterin.
 
     0.633
PAE3452
Hypothetical; Conserved within genome.
       0.429
Your Current Organism:
Pyrobaculum aerophilum
NCBI taxonomy Id: 178306
Other names: P. aerophilum str. IM2, Pyrobaculum aerophilum IM2, Pyrobaculum aerophilum str. IM2, Pyrobaculum aerophilum strain IM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.