Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
PAE3471Transcriptional regulatory protein, AsnC family, putative; Regulatory functions; General. (168 aa)    
Predicted Functional Partners:
PAE3469
Transcriptional regulatory protein, AsnC family, putative; Regulatory functions; General.
   
 
 0.824
PAE1507
Transcriptional regulatory protein, AsnC family; Regulatory functions; General.
   
 
 0.711
rps3ae
Protein synthesis; Ribosomal proteins: synthesis and modification; Belongs to the eukaryotic ribosomal protein eS1 family.
       0.566
PAE2182
3-hydroxy-3-methylglutaryl-coenzyme A reductase (HMG-CoA reductase); Fatty acid and phospholipid metabolism; Biosynthesis; Belongs to the HMG-CoA reductase family.
     
 0.505
tbp
Transcription initiation factor TFIID (TATA-binding); General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation.
      
 0.480
PAE3470
Hypothetical protein.
       0.477
PAE3468
Conserved hypothetical protein.
  
    0.431
Your Current Organism:
Pyrobaculum aerophilum
NCBI taxonomy Id: 178306
Other names: P. aerophilum str. IM2, Pyrobaculum aerophilum IM2, Pyrobaculum aerophilum str. IM2, Pyrobaculum aerophilum strain IM2
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