STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAE3471Transcriptional regulatory protein, AsnC family, putative; Regulatory functions; General. (168 aa)    
Predicted Functional Partners:
PAE3469
Transcriptional regulatory protein, AsnC family, putative; Regulatory functions; General.
   
 
 0.779
PAE1507
Transcriptional regulatory protein, AsnC family; Regulatory functions; General.
   
 
 0.642
PAE2758
Cation-transporting ATPase (P-type); Transport and binding proteins; Cations.
     
 0.585
rps3ae
Protein synthesis; Ribosomal proteins: synthesis and modification; Belongs to the eukaryotic ribosomal protein eS1 family.
       0.567
PAE3470
Hypothetical protein.
       0.475
PAE2130
ATP-dependent helicase, putative; Unclassified.
 
 
   0.437
PAE2362
ATP-dependent helicase; Unclassified.
 
 
   0.437
PAE3468
Conserved hypothetical protein.
  
  
 0.436
rps8e
Protein synthesis; Ribosomal proteins: synthesis and modification.
 
     0.415
Your Current Organism:
Pyrobaculum aerophilum
NCBI taxonomy Id: 178306
Other names: P. aerophilum str. IM2, Pyrobaculum aerophilum IM2, Pyrobaculum aerophilum str. IM2, Pyrobaculum aerophilum strain IM2
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.