Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PAE3475Indolepyruvate ferredoxin oxidoreductase beta subunit; Energy metabolism; Fermentation. (181 aa)    
Predicted Functional Partners:
PAE3477
Indolepyruvate ferredoxin oxidoreductase alpha subunit part 2, authentic frameshift; Energy metabolism; Fermentation.
 
 
 0.983
PAE3478
Indolepyruvate ferredoxin oxidoreductase alpha subunit part 1, authentic frameshift; Energy metabolism; Fermentation.
 
 
 0.975
PAE3274
2-ketoacid ferredoxin oxidoreductase beta subunit; Energy metabolism; Fermentation.
  
 
 0.892
PAE0938
2-oxoacid ferredoxin oxidoreductase beta subunit; Energy metabolism; Electron transport.
  
 
 0.839
PAE1558
2-oxoacid ferredoxin oxidoreductase beta subunit; Energy metabolism; Electron transport.
  
 
 0.839
PAE2737
2-oxoacid ferredoxin oxidoreductase beta subunit; Energy metabolism; Electron transport.
  
 
 0.839
PAE1043
Pyruvate ferredoxin oxidoreductase beta subunit (porB); Energy metabolism; Fermentation.
  
 
 0.838
PAE1041
Pyruvate ferredoxin oxidoreductase delta subunit (porD); Energy metabolism; Fermentation.
  
 
 0.691
PAE3276
2-ketoacid ferredoxin oxidoreductase delta subunit; Energy metabolism; Fermentation.
  
 
 0.691
PAE0939
2-oxoacid ferredoxin oxidoreductase alpha subunit; Energy metabolism; Electron transport.
  
 
 0.689
Your Current Organism:
Pyrobaculum aerophilum
NCBI taxonomy Id: 178306
Other names: P. aerophilum str. IM2, Pyrobaculum aerophilum IM2, Pyrobaculum aerophilum str. IM2, Pyrobaculum aerophilum strain IM2
Server load: low (16%) [HD]