STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAE3513Resolvase, conjectural; DNA metabolism; DNA replication, recombination, and repair. (251 aa)    
Predicted Functional Partners:
PAE3512
Hypothetical protein.
       0.793
PAE3482
Hypothetical protein.
   
    0.681
PAE3683
Hypothetical protein.
   
    0.671
PAE3509
Hypothetical protein.
       0.541
PAE1538
Hypothetical protein.
  
    0.533
PAE2751
Cytochrome C-type biogenesis protein (ccdA), conjectural; Energy metabolism; Electron transport.
  
    0.533
PAE1328
Conserved hypothetical protein.
  
    0.499
PAE0242
Hypothetical protein.
  
  
 0.466
PAE3208
Helix-turn-helix protein; Unclassified.
 
  
 0.437
PAE0966
Conserved hypothetical protein.
  
    0.419
Your Current Organism:
Pyrobaculum aerophilum
NCBI taxonomy Id: 178306
Other names: P. aerophilum str. IM2, Pyrobaculum aerophilum IM2, Pyrobaculum aerophilum str. IM2, Pyrobaculum aerophilum strain IM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.