Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PAE3554 | PAE3558 | PAE3554 | PAE3558 | Mannose-1-phosphate guanyltransferase; Purines, pyrimidines, nucleosides, and nucleotides; Sugar-nucleotide biosynthesis and conversions. | Hypothetical protein. | 0.555 |
PAE3554 | PAE3559 | PAE3554 | PAE3559 | Mannose-1-phosphate guanyltransferase; Purines, pyrimidines, nucleosides, and nucleotides; Sugar-nucleotide biosynthesis and conversions. | HIT family protein; Unclassified. | 0.587 |
PAE3554 | PAE3560 | PAE3554 | PAE3560 | Mannose-1-phosphate guanyltransferase; Purines, pyrimidines, nucleosides, and nucleotides; Sugar-nucleotide biosynthesis and conversions. | Hypothetical protein. | 0.501 |
PAE3554 | PAE3561 | PAE3554 | PAE3561 | Mannose-1-phosphate guanyltransferase; Purines, pyrimidines, nucleosides, and nucleotides; Sugar-nucleotide biosynthesis and conversions. | Conserved hypothetical protein. | 0.582 |
PAE3554 | PAE3562 | PAE3554 | PAE3562 | Mannose-1-phosphate guanyltransferase; Purines, pyrimidines, nucleosides, and nucleotides; Sugar-nucleotide biosynthesis and conversions. | DNA-directed RNA polymerase subunit E' (rpoE1); Transcription; DNA-dependent RNA polymerase. | 0.421 |
PAE3554 | guaA | PAE3554 | PAE3369 | Mannose-1-phosphate guanyltransferase; Purines, pyrimidines, nucleosides, and nucleotides; Sugar-nucleotide biosynthesis and conversions. | GMP synthetase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.509 |
PAE3558 | PAE3554 | PAE3558 | PAE3554 | Hypothetical protein. | Mannose-1-phosphate guanyltransferase; Purines, pyrimidines, nucleosides, and nucleotides; Sugar-nucleotide biosynthesis and conversions. | 0.555 |
PAE3558 | PAE3559 | PAE3558 | PAE3559 | Hypothetical protein. | HIT family protein; Unclassified. | 0.678 |
PAE3558 | PAE3560 | PAE3558 | PAE3560 | Hypothetical protein. | Hypothetical protein. | 0.689 |
PAE3558 | PAE3561 | PAE3558 | PAE3561 | Hypothetical protein. | Conserved hypothetical protein. | 0.689 |
PAE3558 | PAE3562 | PAE3558 | PAE3562 | Hypothetical protein. | DNA-directed RNA polymerase subunit E' (rpoE1); Transcription; DNA-dependent RNA polymerase. | 0.490 |
PAE3558 | spt4 | PAE3558 | PAE3563 | Hypothetical protein. | DNA-directed RNA polymerase subunit E'' (rpoE2); Stimulates transcription elongation; Belongs to the archaeal Spt4 family. | 0.490 |
PAE3559 | PAE3554 | PAE3559 | PAE3554 | HIT family protein; Unclassified. | Mannose-1-phosphate guanyltransferase; Purines, pyrimidines, nucleosides, and nucleotides; Sugar-nucleotide biosynthesis and conversions. | 0.587 |
PAE3559 | PAE3558 | PAE3559 | PAE3558 | HIT family protein; Unclassified. | Hypothetical protein. | 0.678 |
PAE3559 | PAE3560 | PAE3559 | PAE3560 | HIT family protein; Unclassified. | Hypothetical protein. | 0.825 |
PAE3559 | PAE3561 | PAE3559 | PAE3561 | HIT family protein; Unclassified. | Conserved hypothetical protein. | 0.791 |
PAE3559 | PAE3562 | PAE3559 | PAE3562 | HIT family protein; Unclassified. | DNA-directed RNA polymerase subunit E' (rpoE1); Transcription; DNA-dependent RNA polymerase. | 0.560 |
PAE3559 | guaA | PAE3559 | PAE3369 | HIT family protein; Unclassified. | GMP synthetase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.531 |
PAE3559 | rpoH | PAE3559 | PAE0664 | HIT family protein; Unclassified. | DNA-directed RNA polymerase subunit H (rpoH); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoH/eukaryotic RPB5 RNA polymerase subunit family. | 0.534 |
PAE3559 | rpoK | PAE3559 | PAE3271 | HIT family protein; Unclassified. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoK/eukaryotic RPB6 RNA polymerase subunit family. | 0.504 |
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